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cf issue #472
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issue #413
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this avoids logging a traceback on temporarily locked indices
and imports db.error classes directly for use in DBManager
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This moves the creation / destruction of the notmuch.Database object
used to change the index to the code for a single writequeue entry:
Instead of using one db for all entries, we let each one have its own.
This *should* allow the "afterwards" callback allow to retrieve data
from an updated index, that already reflects the changes just made.
issue #317
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this introduces a new method `count_threads` for DBManager that
uses a recently introduced getter of the same name in the bindings.
We also adjust the dependencies for the bindings accordingly
issue #178
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this moves messages into the new submodule alot.db
which from now on also contains Threads in a separate file
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