From e31f3f860ae1e4163dda2325db239b4c39614e50 Mon Sep 17 00:00:00 2001 From: tradke Date: Wed, 4 Feb 2004 13:44:42 +0000 Subject: Write all the Cactus parameters into a dataset rather than a single string attribute. This fixes a problem with very many parameters to dump as HDF5 has a 16k size limit on attributes. git-svn-id: http://svn.cactuscode.org/arrangements/CactusPUGHIO/IOHDF5Util/trunk@106 7842ec3a-9562-4be5-9c5b-06ba18f2b668 --- src/RecoverVar.c | 44 +++++++++++++++++++++++++++++++------------- 1 file changed, 31 insertions(+), 13 deletions(-) (limited to 'src/RecoverVar.c') diff --git a/src/RecoverVar.c b/src/RecoverVar.c index 8724f7b..f8e63da 100644 --- a/src/RecoverVar.c +++ b/src/RecoverVar.c @@ -247,14 +247,14 @@ int IOHDF5Util_RecoverGHextensions (cGH *GH, const fileinfo_t *fileinfo) (don't have subcommunicators yet) */ int IOHDF5Util_RecoverParameters (const fileinfo_t *fileinfo) { - hid_t group, attr, atype; + hid_t group, attr, dataset, atype; char *parameters; CCTK_INT4 parameterSize; DECLARE_CCTK_PARAMETERS /* To make the compiler happy */ - group = attr = 0; + group = attr = dataset = -1; parameters = NULL; parameterSize = 0; @@ -267,21 +267,35 @@ int IOHDF5Util_RecoverParameters (const fileinfo_t *fileinfo) } /* the parameters are stored in the CACTUS_PARAMETERS_GROUP group - in the attribute ALL_PARAMETERS */ + in the attribute (old style) or dataset (new style) ALL_PARAMETERS */ group = H5Gopen (fileinfo->file, CACTUS_PARAMETERS_GROUP); if (group > 0) { - attr = H5Aopen_name (group, ALL_PARAMETERS); + H5E_BEGIN_TRY + { + attr = H5Aopen_name (group, ALL_PARAMETERS); + dataset = H5Dopen (group, ALL_PARAMETERS); + } H5E_END_TRY } - if (group > 0 && attr > 0) + if (group >= 0 && (attr >= 0 || dataset >= 0)) { - HDF5_ERROR (atype = H5Aget_type (attr)); - parameterSize = H5Tget_size (atype); - parameters = malloc (parameterSize + 1); - HDF5_ERROR (H5Aread (attr, atype, parameters)); - parameters[parameterSize] = 0; - HDF5_ERROR (H5Tclose (atype)); + if (attr >= 0) + { + HDF5_ERROR (atype = H5Aget_type (attr)); + parameterSize = H5Tget_size (atype); + parameters = malloc (parameterSize + 1); + HDF5_ERROR (H5Aread (attr, atype, parameters)); + parameters[parameterSize] = 0; + HDF5_ERROR (H5Tclose (atype)); + } + else + { + parameterSize = H5Dget_storage_size (dataset); + parameters = malloc (parameterSize); + HDF5_ERROR (H5Dread (dataset, H5T_NATIVE_CHAR, H5S_ALL, H5S_ALL, + H5P_DEFAULT, parameters)); + } } else { @@ -289,11 +303,15 @@ int IOHDF5Util_RecoverParameters (const fileinfo_t *fileinfo) "Is this really a Cactus HDF5 checkpoint file ?"); } - if (attr > 0) + if (attr >= 0) { HDF5_ERROR (H5Aclose (attr)); } - if (group > 0) + if (dataset >= 0) + { + HDF5_ERROR (H5Dclose (dataset)); + } + if (group >= 0) { HDF5_ERROR (H5Gclose (group)); } -- cgit v1.2.3