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* Added new command line option '--logdir <dir>' which sets the output directorytradke2006-06-29
| | | | | | | | | | for logfiles created by the \texttt{-r} option. If the directory doesn't exist yet, it will be created by Cactus. This applies patch http://www.cactuscode.org/old/pipermail/developers/2006-June/004901.html. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4337 17b73243-c579-4c4c-a9d2-2d5706c11dac
* description of command-line optionsjthorn2006-06-23
| | | | | | | | | | | | * make the acceptable arguments for --buffering explicit in the table by dropping <mode> and writing [no|line|full] explicitly ==> this means that the table (A3.1) now gives a full description of the syntax, without needing to page ahead to the text description to see what <mode> can be * ditto in the text description git-svn-id: http://svn.cactuscode.org/flesh/trunk@4334 17b73243-c579-4c4c-a9d2-2d5706c11dac
* description of command-line options:jthorn2006-06-23
| | | | | | | | * describe --foo as standard long-option syntax, with -foo deprecated * also describe other syntax rules git-svn-id: http://svn.cactuscode.org/flesh/trunk@4333 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Add a new command line option to select the buffering mode of stdout.schnetter2006-06-23
| | | | | | | | | | | | | The option is "-b <mode>", or "-buffering=<mode>", where mode can be "no", "line", or "full". This option uses the ANSI C function call setvbuf() to select the corresponding buffering mode. The buffering mode can be selected only once in a portable programme, and it has to be selected before the first output occurs. This means that it has to be implemented in the flesh. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4329 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Add a new configuration flag PROFILE=yes, which enables profiling in aschnetter2006-06-23
| | | | | | | | | | | | | | | | | | | build. This flag is equivalent to OPTIMISE=yes and DEBUG=yes. Additional compiler options {C,CXX,F77,F90}_PROFILE_FLAGS are also introduced. The configuration stage sets the F77 flags to the F90 flags if an F90 compiler is found. This flag setting was done too early, namely before the default values for the F90 flags were set. This flag setting has been moved to a later time. The link command used undefined make variables $(OPTIMISE_C) etc. These variables have been removed. Instead $(CXX_OPTIMISE_FLAGS) etc. are added to the link statement. This makes the linker pick up the correct flags e.g. for profiling. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4327 17b73243-c579-4c4c-a9d2-2d5706c11dac
* fix aliased-function example so we can pass input to it as well as get output!jthorn2006-06-22
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4326 17b73243-c579-4c4c-a9d2-2d5706c11dac
* fix description of INOUT arrays for aliased fnsjthorn2006-06-22
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4325 17b73243-c579-4c4c-a9d2-2d5706c11dac
* aliased functions INOUT arguments:jthorn2006-06-22
| | | | | | | | * oops, another place where INOUT needs to be mentioned * clarify that OUT or INOUT array arguments may indeed be modified git-svn-id: http://svn.cactuscode.org/flesh/trunk@4324 17b73243-c579-4c4c-a9d2-2d5706c11dac
* += INOUT intent for aliaed-function arguments, as perjthorn2006-06-22
| | | | | | | | http://www.cactuscode.org/old/pipermail/developers/2006-June/002882.html and following discussion git-svn-id: http://svn.cactuscode.org/flesh/trunk@4323 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Small layout change.schnetter2006-06-13
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4321 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Update FAQ entry about compiling Fortran thorns in the correct order.schnetter2006-06-13
| | | | | | | | | Tell people to use capabilities instead of make.configuration.defn. Update FAQ entry about detecting MPI in make.configuration.defn. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4320 17b73243-c579-4c4c-a9d2-2d5706c11dac
* permute order of entries forjthorn2006-05-31
| | | | | | | | | | | CCTK_MaxTimeLevelsGI() CCTK_MaxTimeLevelsGN() CCTK_MaxTimeLevelsVI() CCTK_MaxTimeLevelsVN() to be in alphabetical order (and all come before CCTK_MyProc()) git-svn-id: http://svn.cactuscode.org/flesh/trunk@4309 17b73243-c579-4c4c-a9d2-2d5706c11dac
* move CCTK_MyProc entry to its proper place for alphabetical orderjthorn2006-05-31
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4308 17b73243-c579-4c4c-a9d2-2d5706c11dac
* fix syntax-error typo in description of CCTK_ReduceLocArrayToArray1D()jthorn2006-05-31
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4307 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Document that the old local reduction functionsjthorn2006-05-31
| | | | | | | | | | | | | | | CCTK_ReduceLocScalar() CCTK_ReduceLocArrayToArray1D() CCTK_ReduceLocArrayToArray2D() CCTK_ReduceLocArrayToArray3D() don't modify the GH they're passed (I verified this by looking at the prototypes in the flesh), i.e. have that argument be of type const cGH *GH rather than cGH *GH git-svn-id: http://svn.cactuscode.org/flesh/trunk@4306 17b73243-c579-4c4c-a9d2-2d5706c11dac
* clarify distinction between CCTK_SyncGroup() and CCTK_SyncGroupI()jthorn2006-05-30
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4305 17b73243-c579-4c4c-a9d2-2d5706c11dac
* += (the previously-undocumented function) CCTK_SyncGroupI()jthorn2006-05-30
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4304 17b73243-c579-4c4c-a9d2-2d5706c11dac
* latex comments += describe SeeAlso2 environmentjthorn2006-05-30
| | | | | | | (no change in non-comment latex code) git-svn-id: http://svn.cactuscode.org/flesh/trunk@4303 17b73243-c579-4c4c-a9d2-2d5706c11dac
* redo description of CCTK_SyncGroup()jthorn2006-05-26
| | | | | | | | | | | * use modern FunctionDescription environment * document that GH argument is pointer-to-const (i.e. document that CCTK_SyncGroup doesn't modify the GH) * document that this is a collective operation * add an example git-svn-id: http://svn.cactuscode.org/flesh/trunk@4302 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Document that configuration options can also be passed via shell environmenttradke2006-05-23
| | | | | | | variables. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4301 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Fixed a couple small typos while preparing my talk on Cactus I/O infrastructure.tradke2006-05-23
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4300 17b73243-c579-4c4c-a9d2-2d5706c11dac
* document the previously-undocumented flesh APIsjthorn2006-05-14
| | | | | | | CCTK_GroupTagsTable() and CCTK_GroupTagsTableI() git-svn-id: http://svn.cactuscode.org/flesh/trunk@4297 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Apply a slightly-tweaked version of David Rideout's patchjthorn2006-05-11
| | | | | | | | | | http://www.cactuscode.org/old/pipermail/patches/2006-February/000147.html based on discussions at today's access-grid "Cactus call": "Inherits" et al get *groups* of variables from other *implementations*. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4295 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Describe the RECOVER_PARAMETERS bin better.schnetter2006-05-07
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4289 17b73243-c579-4c4c-a9d2-2d5706c11dac
* More detail on Fortran file name extensions.swhite2006-04-24
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4286 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Corrected information about time bins required to implement checkpointing.swhite2006-03-29
| | | | | | | made CVS to ignore Latex .out files git-svn-id: http://svn.cactuscode.org/flesh/trunk@4275 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Correct typographical error.schnetter2006-03-20
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4271 17b73243-c579-4c4c-a9d2-2d5706c11dac
* replace a PUGH_ with CCTK_ (in a CCTK function name)rideout2006-02-24
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4261 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Latex, formattingswhite2006-02-21
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4260 17b73243-c579-4c4c-a9d2-2d5706c11dac
* more consistent wordings in sect 3.1swhite2006-02-21
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4259 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Correct URL for GetCactusswhite2006-02-21
| | | | | | | | Mention of MakeThornList Updated Latex, formatting git-svn-id: http://svn.cactuscode.org/flesh/trunk@4258 17b73243-c579-4c4c-a9d2-2d5706c11dac
* commented out references to non-existent documentation,swhite2006-02-21
| | | | | | | | | Toned down the language Updated address Updated LaTeX git-svn-id: http://svn.cactuscode.org/flesh/trunk@4257 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Added missing synopsis for Fortran routine CCTK_InterpLocalUniform.tradke2006-02-14
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4254 17b73243-c579-4c4c-a9d2-2d5706c11dac
* use size_t for 1-D array index in CCTK_GFINDEX3D examplejthorn2006-02-09
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4252 17b73243-c579-4c4c-a9d2-2d5706c11dac
* add missing line breakschnetter2006-01-28
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4245 17b73243-c579-4c4c-a9d2-2d5706c11dac
* correct minor typographical errorsschnetter2006-01-28
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4244 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Mentions some more makefile flags. Explain them roughly.schnetter2006-01-28
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4243 17b73243-c579-4c4c-a9d2-2d5706c11dac
* tweak how-to-compute-global-xyz-coords examplejthorn2006-01-19
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4236 17b73243-c579-4c4c-a9d2-2d5706c11dac
* expand discussion of "how to compute global coordinates" examplejthorn2006-01-19
| | | | | | | | a bit more; move sample code into a new figure so it's not broken across two pages git-svn-id: http://svn.cactuscode.org/flesh/trunk@4235 17b73243-c579-4c4c-a9d2-2d5706c11dac
* section B7.2.3 "Cactus Variables":jthorn2006-01-19
| | | | | | | | clarify and expand example of how to calculate global xyz coordinates of a grid point git-svn-id: http://svn.cactuscode.org/flesh/trunk@4234 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Documented CCTK_TerminationReachedswhite2006-01-13
| | | | | | | More fully documented CCTK_TerminateNext git-svn-id: http://svn.cactuscode.org/flesh/trunk@4233 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Util_vsnprintf() += seealso to <stdarg.h>jthorn2006-01-05
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4229 17b73243-c579-4c4c-a9d2-2d5706c11dac
* fix Util_vsnprintf() discussion to be about Util_vsnprintf()jthorn2006-01-05
| | | | | | | | -- previously it was cut-n-pasted from other functions and didn't actually mention Util_vsnprintf() git-svn-id: http://svn.cactuscode.org/flesh/trunk@4228 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Add more detail to how parameter recovery works, explaining theschnetter2006-01-04
| | | | | | | meaning of the return value. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4227 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Indicate that RECOVER_PARAMTERS routines are called before STARTUP routinesschnetter2006-01-04
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4226 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Util_snprintf() += clarify comment in example codejthorn2006-01-03
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4225 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Util_snprintf() += one more bugfix -- it's <stdarg.h>, not <stdargs.h>jthorn2006-01-03
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4224 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Util_snprintf() += tweak footnote wordingjthorn2006-01-03
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4223 17b73243-c579-4c4c-a9d2-2d5706c11dac
* change obselete <varargs.h> to modern <stdarg.h> in SeeAlso referencejthorn2006-01-03
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4222 17b73243-c579-4c4c-a9d2-2d5706c11dac
* fix Util_snprintf() description so it has correct title (previously title ↵jthorn2006-01-03
| | | | | | said Util_sprintf()) git-svn-id: http://svn.cactuscode.org/flesh/trunk@4221 17b73243-c579-4c4c-a9d2-2d5706c11dac
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