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* Use basename to lead strip directory from full path to the compilers.diener2011-10-20
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4747 17b73243-c579-4c4c-a9d2-2d5706c11dac
* cactus.sty: Remove SVN date and revision information from documentationhinder2011-10-19
| | | | | | This SVN information causes problems when Cactus is not stored in SVN. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4746 17b73243-c579-4c4c-a9d2-2d5706c11dac
* ThornUtils.pm: Escape # character for LaTeXhinder2011-10-19
| | | | | | Some parameter description strings contain "#" to mean "number". git-svn-id: http://svn.cactuscode.org/flesh/trunk@4745 17b73243-c579-4c4c-a9d2-2d5706c11dac
* doc: Use absolute instead of relative paths for arrangement and thorn ↵hinder2011-10-19
| | | | | | | | | documentation This fixes a problem which occurs when the doc directory is actually a symbolic link. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4744 17b73243-c579-4c4c-a9d2-2d5706c11dac
* document ExternalLibraries for HDF5 and Lapackknarf2011-10-19
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4743 17b73243-c579-4c4c-a9d2-2d5706c11dac
* clarify error message about missing aliased functionknarf2011-10-06
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4742 17b73243-c579-4c4c-a9d2-2d5706c11dac
* document VERBOSE=yes (and that SILENT=no is now depreciated)knarf2011-10-04
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4741 17b73243-c579-4c4c-a9d2-2d5706c11dac
* - fix several issues with recent VERBOSE changeknarf2011-10-04
| | | | | | | - re-introduce SILENT=no to set VERBOSE=yes, for some time git-svn-id: http://svn.cactuscode.org/flesh/trunk@4740 17b73243-c579-4c4c-a9d2-2d5706c11dac
* fix issue #586: bashisms, and uppercase VERBOSE=YES, as well as a couple of ↵knarf2011-09-28
| | | | | | minor cosmetics issues git-svn-id: http://svn.cactuscode.org/flesh/trunk@4739 17b73243-c579-4c4c-a9d2-2d5706c11dac
* remove bashisms and unnecessary curly bracesknarf2011-09-28
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4738 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Replace the SILENT option with a VERBOSE option (of opposite meaning). Defaultknarf2011-09-27
| | | | | | | | | is still VERBOSE=no, but this now actually produces a lot less output: almost no "cosmetic" lines (only ---), and no messages for pre- and postprocessing anymore. Add VERBOSE=yes to get the old beavior of SILENT=no. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4737 17b73243-c579-4c4c-a9d2-2d5706c11dac
* add support for testsuite data as (optionally compressed) tarballknarf2011-09-26
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4736 17b73243-c579-4c4c-a9d2-2d5706c11dac
* only try to read test.ccl when it existsknarf2011-09-26
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4735 17b73243-c579-4c4c-a9d2-2d5706c11dac
* fix errorknarf2011-09-26
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4734 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Depreciate config files in test/ directories.knarf2011-09-26
| | | | | | | | | | | | If for some reason there exists both a test.ccl and a file 'config' in a thorn's test directory, Cactus uses the config file while telling the user that it's using the test.ccl. Config is so outdated this shouldn't affect anybody. This patch depreciates config files. Support for test.ccl was added in 2002 and I coulnd't find a single thorn which still uses config files. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4733 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Change case in file name of internal auto-generated fileeschnett2011-09-26
| | | | | | | | | | | | Cactus auto-generates header files from CCL files into the bindings/include directory. One of these files is called ${thorn}_arguments.h, which stands out because "a" is lower case. Other auto-generated files are called e.g. ${thorn}_Schedule.h with an upper case "S". This patch changes "arguments" to upper case "Arguments". git-svn-id: http://svn.cactuscode.org/flesh/trunk@4732 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Add final newlineeschnett2011-09-25
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4731 17b73243-c579-4c4c-a9d2-2d5706c11dac
* document CCTK_ReduceArraysGlobally for fortan in section for ↵knarf2011-09-25
| | | | | | CCTK_ReduceArraysGlobally, not CCTK_ReduceGridArrays git-svn-id: http://svn.cactuscode.org/flesh/trunk@4730 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Regenerate configure scripthinder2011-09-22
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4729 17b73243-c579-4c4c-a9d2-2d5706c11dac
* configure.in: Correct typo in CCTK_CHECK_FUNCS(crypt,…)hinder2011-09-22
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4728 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Regenerate configure scripthinder2011-09-22
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4727 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Detect backtrace-related functions during configurationhinder2011-09-22
| | | | | | | | See https://trac.einsteintoolkit.org/ticket/443 Patch by Roland Haas git-svn-id: http://svn.cactuscode.org/flesh/trunk@4726 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Add information on default scopehinder2011-09-21
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4725 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Correct documentation of Fortran IsImplementationActive prototypeeschnett2011-09-15
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4724 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Jian Tao: let gmake newthorn create configuration.cclknarf2011-09-01
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4723 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Correct definitions of CCTK_LSSH and CCTK_LSSH_IDX in Fortraneschnett2011-08-28
| | | | | | | | Correct definitions of CCTK_LSSH and CCTK_LSSH_IDX in Fortran. Add comments. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4722 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Add (empty) configuration.ccleschnett2011-08-25
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4721 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Allow a configuration.ccl file for the flesheschnett2011-08-25
| | | | | | | | | The mechanism in Cactus that handles configuration.ccl files currently cannot handle a configuration.ccl for the flesh. This patch corrects this. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4720 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Check indices in CCTK_GFINDEX3D and friends when CCTK_DEBUG is definedeschnett2011-08-19
| | | | | | | | Check grid point indices in CCTK_GFINDEX3D and friends when CCTK_DEBUG is defined. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4719 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Support Darwin 11.1 (Mac OS X 10.7.1)eschnett2011-08-19
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4718 17b73243-c579-4c4c-a9d2-2d5706c11dac
* When checking for particular compiler names on AIX, remove the path,eschnett2011-08-17
| | | | | | | and check only the file names themselves. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4717 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Check HAVE_CCTK_C_INLINE to see if inlining is supportedeschnett2011-08-14
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4716 17b73243-c579-4c4c-a9d2-2d5706c11dac
* #define HAVE_CCTK_C_INLINE when inlining is supported, even when theeschnett2011-08-14
| | | | | | | "inline" keyword works as is. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4715 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Flush stdout and stderr before and after outputting a parametereschnett2011-08-13
| | | | | | | | warning. This helps prevent mixing of stdout and stderr when both are redirected to the same file. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4714 17b73243-c579-4c4c-a9d2-2d5706c11dac
* dry run of autoconf, no changes to configure.inknarf2011-08-04
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4713 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Support Lioneschnett2011-08-02
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4712 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Expand $extra in auto-generated comment in makefile fragmenteschnett2011-07-06
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4711 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Accept comments in multi-line strings in parameter fileseschnett2011-07-02
| | | | | | | | | | Modify the parameter file parser to accept comments in multi-line strings. These comments extend from a "#" character to the end of the line. This makes it much easier to comment out variables in output strings. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4710 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Correct documentation of if statements in scheduleeschnett2011-07-02
| | | | | | | | | | | | | | | Change the documented allowed "if" statements in schedule files from if(CCTK_EQUALS(<parameter>, <value>)) { ... } to if(<expression>) { ... } which is what is actually allowed (and commonly used). git-svn-id: http://svn.cactuscode.org/flesh/trunk@4709 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Describe GLOBAL-EARLY, GLOBAL-LATE, META-EARLY and META-LATEeschnett2011-07-02
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4708 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Allow parameters in STORAGE specificationseschnett2011-07-02
| | | | | | | | Allow parameters in addition to integer constants in STORAGE specifications in schedule.ccl. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4707 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Allow parameters in STORAGE specificationseschnett2011-07-02
| | | | | | | | Allow parameters in addition to integer constants in STORAGE specifications in schedule.ccl. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4706 17b73243-c579-4c4c-a9d2-2d5706c11dac
* When linking, sort library directories so that system directorieseschnett2011-06-28
| | | | | | | | | (/opt/local/*) come last. This increases the probability that the correct library is used, e.g. if a library exists both in a specific path and in /opt/local/lib. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4705 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Autodetect <sched.h> and sched_getaffinity()eschnett2011-06-28
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4704 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Add support for Darwin 10.8.0eschnett2011-06-24
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4703 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Improve auto-detection of "restrict" keywordeschnett2011-06-08
| | | | | | | | | | | | | | | | | | | | | | | | | Update and improve the auto-detection of the "restrict" keyword; add more test cases to detect more possible failures. Disable testing the array syntax void foo (double A[restrict]); where the "restrict" keyword is given within the square brackets; instead, one can use the pointer syntax void foo (double *restrict const A); which is tested. Add support for the gcc built-in function "builtin_expect", which tells the compiler the value that an expression is most likely to have. Re-enable the (currently commented out) definitions for attribute(hot) and attribute(cold). git-svn-id: http://svn.cactuscode.org/flesh/trunk@4702 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Regenerate configure fileeschnett2011-04-22
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4701 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Reorder CUDA makefile ruleseschnett2011-04-22
| | | | | | | | | The rules to build CUDA source files are very similar to those for C and C++, and different from those for the Fortran. Reorder reorder these makefile rules to make the code easier to understand. git-svn-id: http://svn.cactuscode.org/flesh/trunk@4700 17b73243-c579-4c4c-a9d2-2d5706c11dac
* Jian Tao: describe the flags to support CUDA programming in Cactus.knarf2011-04-19
| | | | git-svn-id: http://svn.cactuscode.org/flesh/trunk@4698 17b73243-c579-4c4c-a9d2-2d5706c11dac
* f_file_processor.pl: Fix handling of continuation lines with OpenMPhinder2011-04-11
| | | | | | | | | | | | | | | | | | | | | | OpenMP requires continuation lines in Fortran 90 (and possibly Fortran 77 as well though I have not checked that) to start with the OMP sentinel (https://computing.llnl.gov/tutorials/openMP/#Directives). This patch ensures that a sentinel OMP or HPF is repeated when a line starting with that sentinel is broken to limit its length to 132 characters. It also adds a case-insensitive flag to the check for "!" like comments and adds extra backslashes to the standard_comments regex to properly match $OMP after all metacharacters have been handled. Tested with LoopControl's Fortran interface on gcc 4.5,Intel 11.1 and PGI. (Patch by Roland Haas) git-svn-id: http://svn.cactuscode.org/flesh/trunk@4697 17b73243-c579-4c4c-a9d2-2d5706c11dac
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